Your Certified Service Provider

SeqMatic is a CLIA/CAP accredited next generation sequencing (NGS) contract research organization based in Fremont, California. Founded in 2012 by former Illumina R&D scientists, SeqMatic provides end to end sequencing services including DNA sequencing, RNA sequencing, single cell RNA sequencing, epigenomics, spatial transcriptomics, histopathology, and bioinformatics analysis. SeqMatic is a Certified Service Provider for Illumina, 10x Genomics, and Parse Biosciences. The laboratory operates under CLIA and CAP quality standards, applying regulatory grade quality systems to all research and clinical projects.

SeqMatic offers a comprehensive range of NGS services:

• DNA sequencing: whole genome sequencing (WGS), whole exome sequencing (WES), PCR amplicon sequencing, metagenomics, and non-model organism sequencing
• RNA sequencing: bulk mRNA seq, bulk total RNA, miRNA and small RNA, FFPE RNA, and exosome sequencing
• Single cell RNA sequencing on 10x Genomics Chromium, Parse Biosciences Evercode, and Scale Bio platforms, including gene expression, immune profiling, CITE seq, ATAC, Multiome, and methylation
• Epigenomics: bulk ATAC seq, methylation (methyl seq), single cell ATAC seq, ChIP seq, and Multiome
• Spatial transcriptomics: Visium and CytAssist
• Histopathology: necropsy and grossing, tissue processing, embedding and sectioning, histological staining assays, whole slide imaging and analysis, and pathologist review
• Pre-clinical and clinical laboratory services under CLIA/CAP accreditation
• Bioinformatics analysis at primary, secondary, and tertiary tiers across all service types

SeqMatic also offers general services including nucleic acid extraction, pre-made library sequencing, project planning and consultation, and express turnaround options.

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Yes. SeqMatic operates a CLIA licensed and CAP accredited laboratory. CLIA (Clinical Laboratory Improvement Amendments) and CAP (College of American Pathologists) accreditation means the laboratory meets federally mandated quality control, proficiency testing, and personnel standards. This accreditation applies to Laboratory Developed Tests (LDTs) and clinical projects performed at SeqMatic. CLIA/CAP accreditation does not apply to research use only (RUO) projects; however, SeqMatic follows CLIA quality standards throughout the laboratory, including RUO work. For researchers whose work may support IND filings or clinical translation, this means sequencing data is generated under regulatory grade quality systems from the start.

CLIA/CAP laboratory services →

SeqMatic is located at 48383 Fremont Blvd., Ste. 120, Fremont, CA 94538. All sequencing is performed at this facility. SeqMatic does not subcontract work to third party or overseas laboratories.

SeqMatic accepts shipped samples from anywhere in the United States and internationally. SeqMatic holds import permits from the Centers for Disease Control (CDC) and the US Department of Agriculture (USDA), following all import compliance requirements. For Bay Area researchers, SeqMatic also offers local sample pickup services described in the FAQ below.

Sample submission instructions →

Submit a quote request through the SeqMatic website. A member of the technical team will follow up to discuss your project objectives, sample types, omics service of interest, platform options, sequencing requirements, and more. SeqMatic provides a scientific consultation for every project to help you select the right workflow, chemistry, and sequencing depth before any samples are committed.

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Project planning and consultation →

Yes, for researchers in the San Francisco Bay Area. SeqMatic offers two local services not available from other CROs. For customers interested in single cell services, Onsite Seq brings a SeqMatic team member to your laboratory to perform cell fixation or GEM creation on location for any omics workflow, protecting cell viability for fresh samples.

Fetch Seq is a local courier pickup service that delivers your samples to SeqMatic, typically within 1 to 1.5 hours of pickup. Both services cover a 100 mile radius from Fremont, CA. Researchers outside the Bay Area can ship samples to SeqMatic from anywhere in the United States and internationally.

Sample submission instructions →

Yes. The BIOSECURE Act, enacted in December 2025 as part of the Fiscal Year 2026 National Defense Authorization Act, restricts US federal agencies, contractors, and grant recipients from using biotechnology equipment or services from designated biotechnology companies of concern, defined as entities owned or controlled by foreign adversary governments. SeqMatic is a US owned and operated, CLIA/CAP accredited laboratory in Fremont, California. All sequencing is performed in house in the United States, with no subcontracting to third party or overseas facilities. Researchers using federal grant or contract funding can work with SeqMatic without the supply chain restrictions the BIOSECURE Act is designed to address.