Published Scientific Research Citations
Published scientific research citations for SeqMatic are listed monthly on Google Scholar. Consequently, this search engine, which indexes articles, theses, books, abstracts, court opinions, and more, provides a comprehensive repository of SeqMatic’s scholarly impact. The sources that Google Scholar draws upon are diverse, including academic publishers, professional societies, online repositories, universities, and other websites, thereby covering a wide range of disciplines.
SeqMatic’s products and services have been cited in dozens of scientific research publications worldwide for over a decade. As a result, our laboratory takes pride in offering excellent services that aid the advancement of science through our expert omics solutions. Furthermore, this dedication to facilitating scientific progress has established SeqMatic as a trusted partner for researchers globally.
The following list highlights the latest publications on various NGS, multiomics, and histopathology research topics where SeqMatic is cited as a CRO Laboratory Service Provider. These research publications and citations, available in Google Scholar, underscore the value that SeqMatic’s services bring to the scientific community.
Research Publications & Citation Mentions
This list is a snapshot of all research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
This list is a snapshot of all 2025 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Khodasevich, Dennis, et al. “Blood transcriptomic associations of epigenetic age in adolescents.” Epigenetics 20.1 (2025): 2503824.
- Fries, Gabriel R., et al. “Differential microRNA profiling of blood L1CAM and bulk extracellular vesicles in bipolar disorder.” Epigenomics 17.18 (2025): 1355-1365.
- Fries, Gabriel R., et al. “Differential microRNA expression profiling of peripheral blood L1CAM neural-enriched and bulk extracellular vesicles in individuals with bipolar disorder.” medRxiv (2025).
- Choi, Janghan, et al. “Spatial transcriptomic differences in the breast muscle of grower broilers at 21 and 28 days of age.” Poultry science 104.6 (2025): 105095.
- Everts, Robin E., et al. “Identification of a Novel Haplotype Associated with Roan Coat Color in American Quarter Horses.” Animals 15.16 (2025): 2386.
- Han, Gi Ppeum, et al. “Transcriptomic analysis of the breast muscle at different ages during the grower phase in broilers.” Poultry Science (2025): 105968.
- Yamazaki, Tomoo, et al. “Single‐Nuclei RNA Sequencing Shows the Engagement of PPAR‐Delta Target Genes Primarily in Hepatocytes and Cholangiocytes by the Selective PPAR‐Delta Agonist Seladelpar.” PPAR research 2025.1 (2025): 2935230.
- Škorić, Dijana, et al. “Tomato spotted wilt virus in tomato from Croatia, Montenegro and Slovenia: genetic diversity and evolution.” Frontiers in microbiology 16 (2025): 1618327.
- Lim, Jiwoo, et al. “Comprehensive profiling of serum exosomes by a multi-omics approach reveals potential diagnostic markers for brain metastasis in lung cancer.” Cancers 17.12 (2025): 1929.
- Cheng, Zhang, et al. “Transcriptional fingerprinting of regulatory T cells: ensuring quality in cell therapy applications.” Frontiers in Immunology 16 (2025): 1602172.
Transcriptome-wide RNA expression, Total RNA and small RNA library prearation, whole genome sequencing, bulk RNA sequencing, nuclei isolation, and Parse fixation are some of the featured analysis services provided by SeqMatic in 2025, these are cited in various Google Scholar research listings.
- Soku, Yesutor K., et al. “Feed status and skin injury modulate immunopathology, global gene expression, and survival in channel catfish during virulent Aeromonas hydrophila infection.” Frontiers in Immunology 16 (2025): 1642531.
- D Griffin, Chasen, et al. “Integrating network analysis with in vivo–in situ manipulation to elucidate microbiome dynamics in Aedes albopictus.” FEMS Microbiology Letters 372 (2025): fnaf084.
- Zadegan, Sobhan Bahrami, et al. “Single-nucleus RNA-sequencing reveals the cellular programs driving nematode-induced giant cell formation in tomato.” Horticulture Research 12.11 (2025): uhaf223.
- Zadegan, Sobhan Bahrami, et al. “Single-nucleus RNA-sequencing reveals the cellular programs driving nematode-induced giant cell formation in tomato.” Horticulture Research 12.11 (2025): uhaf223.
- Garrett, Molly J., et al. “Genetic Variation and Metapopulation Structure Inform Recovery Goals in a Threatened Species.” Genes 16.6 (2025): 694.
- Han, Gi Ppeum, et al. “Transcriptomic analysis of the breast muscle at different ages during the grower phase in broilers.” Poultry Science (2025): 105968.
- Chandrakumar, Rishikesan, et al. “SYNPO2L Isoforms Regulate the Action Potential Characteristics and Contractility of Atrial Cardiomyocytes via YAP Signaling to Modulate Atrial Fibrillation Risk.” bioRxiv (2025): 2025-08.
- Fisher, Kaylin, et al. “Polo-like kinase inhibitors increase AAV production by halting cell cycle progression.” Molecular Therapy Methods & Clinical Development 33.1 (2025).
- San Andres, Cristhian F., et al. “Effects of Diurnal Oxygen Variation on Survival, Growth, and Stress Gene Expression in Pacific White Shrimp Litopenaeus vannamei.” Aquaculture Research 2025.1 (2025): 8041189.
- Nair, Anup K., et al. “Modelling the effects of human SUR1 R1420H variation on insulin secretory function using isogenic iPSC-derived pancreatic islets.” Diabetologia (2025): 1-22.
- Montierth, Matthew D., et al. “Deconvolution of Sparse-count RNA Sequencing Data for Tumor Cells Using Embedded Negative Binomial Distributions.” bioRxiv (2025): 2025-11.
Frozen mice livers, American Quarter horses, tomatoes, mosquitoes, and chicken breasts are some of the sample types that SeqMatic analyzed in 2025 and are cited in Google Scholar research topics.
- Redruello Romero, Anais. “New methodologies based on nanotechnology to prepare libraries for massive sequencing: T cell receptor (TCR) and small RNA. Diss.” Universidad de Granada, 2025.
- Saxe, Houston. “The Role of Cell Wall Barrier Function in Walnut Rootstock Resistance: Insights From QTL Analysis, Transcriptomics, and Chemical Assays.” University of California, Davis, 2025.
- Raju, Karthik, et al. “GPR34 regulates microglia state and loss-of-function rescues TREM2 metabolic dysfunction.” bioRxiv (2025): 2025-03.
- de Weerd, Lis, et al. “Early intervention anti-Aβ immunotherapy attenuates microglial activation without inducing exhaustion at residual plaques.” Molecular Neurodegeneration 20.1 (2025): 92.
- Wallace, Kirby A., et al. “A differentiated β-globin gene replacement strategy uses heterologous introns to restore physiological expression.” Molecular Therapy 33.4 (2025): 1407-1419.
- Han, Gi Ppeum, et al. “Transcriptomic analysis of the breast muscle at different ages during the grower phase in broilers.” Poultry Science (2025): 105968.
- de Weerd, Lis, et al. “Anti-Aβ immunotherapy-mediated amyloid clearance attenuates microglial activation without inducing exhaustion at residual plaques.” bioRxiv (2025): 2025-04.
- Ljuma Skupnjak, Lana. Određivanje genomskih determinanti patogenosti soja QX virusa zaraznoga bronhitisa. Diss. Sveučilište u Zagrebu, Sveučilište u Zagrebu Prehrambeno-biotehnološki fakultet, Zavod za biokemijsko inženjerstvo, 2025.
- Robison, Brett, et al. “Engineered ipilimumab variants that bind human and mouse CTLA-4.” MAbs. Vol. 17. No. 1. Taylor & Francis, 2025.
- Roseberry, Thomas, et al. “Sex differences in GLP-1 signaling across species.” bioRxiv (2025): 2025-03.
- Beall, Chloe S. Development and application of a single nucleotide polymorphism panel for individual identification and population genetic assessment of swamp rabbits. Mississippi State University, 2025.
- Bershteyn, Marina, et al. “Human stem cell-derived GABAergic interneuron development reveals early emergence of subtype diversity and gradual electrochemical maturation.” Neuron 113.19 (2025): 3162-3184.
- Shealy, Nicolas G., et al. “Short-term alterations in dietary amino acids override host genetic susceptibility and reveal mechanisms of Salmonella Typhimurium small intestine colonization.” bioRxiv (2025).
- Meca-Laguna, Gabriel, et al. “Γδ T cells target and ablate senescent cells in aging and alleviate pulmonary fibrosis.” bioRxiv (2025): 2025-05.
- Gu, Jiaqi, et al. “Distilling Direct Effects via Conditional Differential Gene Expression Analysis.” bioRxiv (2025): 2025-09.
- Mazan-Mamczarz, Krystyna, et al. “Single-cell and spatial transcriptomics map senescent vascular cells in arterial remodeling during atherosclerosis in mice.” Nature aging 5.8 (2025): 1528-1547.
- Stever, Heather. Insect-Microbial Symbioses and the Relationships Between Hawaiian Nysius Seed Bugs. Diss. University of California, Merced, 2025.
- Flores, Brittany N., et al. “Investigational eIF2B activator DNL343 modulates the integrated stress response in preclinical models of TDP-43 pathology and individuals with ALS in a randomized clinical trial.” Nature Communications 16.1 (2025): 7690.
- Guo, Jing L., et al. “Decreased lipidated ApoE-receptor interactions confer protection against pathogenicity of ApoE and its lipid cargoes in lysosomes.” Cell 188.1 (2025): 187-206.
- Khoury, Nathalie, et al. “Fc-engineered large molecules targeting blood-brain barrier transferrin receptor and CD98hc have distinct central nervous system and peripheral biodistribution.” Nature communications 16.1 (2025): 1822.
- Guo, Jing, et al. “CNS-penetrant NLRP3 inhibitor achieves durable weight loss and reverses hypothalamic inflammation in diet-induced obesity.” bioRxiv (2025): 2025-10.
- McKinney-Aguirre, Caroline A., et al. “Human Placental Extract Enhances Neonatal Intestinal Epithelial Reparative Capacity in Porcine Models.” Cellular and Molecular Gastroenterology and Hepatology (2025): 101619.
- ia, Dan, et al. “The Mouseion at the JAXlibrar y.“
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This list is an extraction of all 2024 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Saxe, Houston J., et al. “Transcriptomic Evidence of a Link between Cell Wall Biogenesis, Pathogenesis, and Vigor in Walnut Root and Trunk Diseases.” International Journal of Molecular Sciences 25.2 (2024): 931.
- Kink, John A., et al. “Large-scale bioreactor production of extracellular vesicles from mesenchymal stromal cells for treatment of acute radiation syndrome.” Stem Cell Research & Therapy 15.1 (2024): 72.
- Moy, Alistar, et al. “Gene expression profiling of Jack Pine (Pinus banksiana) under copper stress: Identification of genes associated with copper resistance.” Plos one 19.3 (2024): e0296027.
- Subedi, Nagendra, et al. “Characterization of Ralstonia pseudosolanacearum diversity and screening tomato, pepper, and eggplant resistance to manage bacterial wilt in South Asia.” PhytoFrontiers™ (2024): PHYTOFR-10.
- Moy, Alistar, and Kabwe Nkongolo. “Decrypting Molecular Mechanisms Involved in Counteracting Copper and Nickel Toxicity in Jack Pine (Pinus banksiana) Based on Transcriptomic Analysis.” Plants 13.7 (2024): 1042.
- Elhalag, Kamel M., et al. “Lytic phages isolated from Egypt for biocontrol of potato soft rot caused by Pectobacterium carotovorum.” Biological Control 189 (2024): 105444.
- Maksimović, Olivera, et al. “Virome analysis of irrigation water sources provides extensive insights into the diversity and distribution of plant viruses in agroecosystems.” Water Research 249 (2024): 120712.
- Ruffolo, Jeffrey A., et al. “Design of highly functional genome editors by modeling the universe of CRISPR-Cas sequences.” bioRxiv (2024): 2024-04.
- Satake, Eiichiro, et al. “Preanalytical considerations in quantifying circulating miRNAs that predict end-stage kidney disease in diabetes.” JCI insight 9.12 (2024): e174153.
- Abrahamian, Peter, et al. “Complete sequence and genome characterization of miscanthus virus M, a new betaflexivirus from Miscanthus sp.” Archives of Virology 169.2 (2024): 27.
Walnuts, potatoes and catfish are some of the sample types that SeqMatic analyzed in 2024 and are cited in Google Scholar research topics.
- Alvarez-Quinto, Robert, et al. “Complete genome sequence of vaccinium-associated virus C, a new member of the family Totiviridae from Vaccinium floribundum.” Archives of Virology 169.4 (2024): 86.
- Aldersey, Johanna E., et al. “Single-nuclei transcriptome analysis of channel catfish spleen provides insight into the immunome of an aquaculture-relevant species.” PLoS One 19.9 (2024): e0309397.
- Klingbeil, E. A., et al. “Manipulation of feeding patterns in high fat diet fed rats improves microbiota composition dynamics, inflammation and gut-brain signaling.” Physiology & Behavior 285 (2024): 114643.
- Jeong, Eunji, et al. “Prebiotic potential of goji berry (Lycium barbarum) in improving intestinal integrity and inflammatory profiles via modification of the gut microbiota in high-fat diet-fed rats.” Journal of Medicinal Food 27.8 (2024): 704-712.
- Rodriguez, Bertha L., et al. “Antitumor activity of a novel LAIR1 antagonist in combination with anti-PD1 to treat collagen-rich solid tumors.” Molecular cancer therapeutics 23.8 (2024): 1144-1158.
- Garrett, Molly J., et al. “Development and validation of a GT‐seq panel for genetic monitoring in a threatened species using minimally invasive sampling.” Ecology and Evolution 14.5 (2024): e11321.
- Benedetti, Camilla, et al. “From follicle to blastocyst: microRNA-34c from follicular fluid-derived extracellular vesicles modulates blastocyst quality.” Journal of animal science and biotechnology 15.1 (2024): 104.
- Tworig, Joshua, et al. “Transcriptomics-informed pharmacology identifies epigenetic and cell cycle regulators as enhancers of AAV production.” bioRxiv (2024): 2024-06.
- Coll, Anna, et al. “The StPti5 ethylene response factor acts as a susceptibility factor by negatively regulating the potato immune response to pathogens.” New Phytologist 244.1 (2024): 202-218.
- Tworig, Joshua, et al. “Transcriptomics-informed pharmacology identifies epigenetic and cell cycle regulators that enhance AAV production.” Molecular Therapy Methods & Clinical Development 32.4 (2024).
Single-nuclei transcriptome analysis, library preparation, amplicon sequencing, and sample preparation for differential gene expression are some of the featured analysis services provided by SeqMatic in 2024, these are cited in various Google Scholar research listings.
- Laliberté, Camille, et al. “Senescent macrophages release inflammatory cytokines and RNA-loaded extracellular vesicles to circumvent fibroblast senescence.” Biomedicines 12.5 (2024): 1089.
- Du, Shicong, et al. “Chronic exposure to polycyclic aromatic hydrocarbons alters skin virome composition and virus–host interactions.” The ISME journal 18.1 (2024): wrae218.
- Yu, Seong-Lan, et al. “Exosomal miR-196b secreted from bronchial epithelial cells chronically exposed to low-dose PM2. 5 promotes invasiveness of adjacent and lung cancer cells.” Toxicology Letters 399 (2024): 9-18.
- Burgos, Hector L., and Mark J. Mandel. “Generation of Barcode‐Tagged Vibrio fischeri Deletion Strains and Barcode Sequencing (BarSeq) for Multiplex Strain Competitions.” Current protocols 4.10 (2024): e70024.
- DelRosso, Nicole, et al. “High-throughput affinity measurements of direct interactions between activation domains and co-activators.” bioRxiv (2024).
- Shams, Shams GE, et al. “Blockade of neutral sphingomyelinase 2 exerts antitumor effect on metastatic castration resistant prostate cancer cells and promotes tumor regression when combined with Enzalutamide.” American Journal of Cancer Research 14.12 (2024): 5697.
- Schupp, Patrick G., et al. “Deconstructing intratumoral heterogeneity through multiomic and multiscale analysis of serial sections.” Cancers 16.13 (2024): 2429.
- Garrett, Molly, et al. “Conservation units and metapopulation structure inform recovery goals in a threatened species.” (2024).
- Al-Turki, Taghreed M., et al. “Telomeric RNA (TERRA) increases in response to spaceflight and high-altitude climbing.” Communications Biology 7.1 (2024): 698.
- Subhan, Bibi S., et al. “Functional high capacity exosome-encapsulating bioinspired hydrogel promotes microvascular bed expansion in diabetic mice.” bioRxiv (2024): 2024-08.
Lung Cancer tumor mRNA, single-end sequencing – senescent biomarkers, human astrocytomas sequencing, long-noncoding RNA sequencing services for telomeric RNA analysis are some of the sample types and topics that SeqMatic provided support in 2024 and are cited in various Google Scholar research listings.
- Moynihan, Kelly D., et al. “IL2 targeted to CD8+ T cells promotes robust effector T-cell responses and potent antitumor immunity.” Cancer discovery 14.7 (2024): 1206-1225.
- Lozano-Iturbe, Víctor, et al. “The binding of pseudomonas aeruginosa to cystic fibrosis bronchial epithelial model cells alters the composition of the exosomes they produce compared to healthy control cells.” International Journal of Molecular Sciences 25.2 (2024): 895.
- Woo, Amelia YM, et al. “Phenotypic high-throughput screening identifies modulators of gut microbial choline metabolism.” bioRxiv (2024): 2024-11.
- Bershteyn, Marina, et al. “Human stem cell-derived GABAergic interneuron development reveals early emergence of subtype diversity followed by gradual electrochemical maturation.” bioRxiv (2024): 2024-12.
- Wu, Fei, et al. “Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight.” Nature Communications 15.1 (2024): 4795.
- Yulyaningsih, Ernie, et al. “DNL343 is an investigational CNS penetrant eukaryotic initiation factor 2B activator that prevents and reverses the effects of neurodegeneration caused by the integrated stress response.” Elife 12 (2024): RP92173.
- Tejwani, Leon, et al. “Lysosomes cell autonomously regulate myeloid cell states and immune responses.” bioRxiv (2024): 2024-11.
- Du, Shicong, et al. “Chronic exposure to polycyclic aromatic hydrocarbons is associated with alterations in skin virome composition and increased virus–host coevolution.” (2024).
- Griffin, Chasen D. “Investigating Microbiome Assembly and Its Impact on the Physiology of Aedes albopictus (Diptera: Culicidae)“. Diss. University of Hawai’i at Manoa, 2024.
- Barker, Scarlett J., et al. “Targeting the transferrin receptor to transport antisense oligonucleotides across the mammalian blood-brain barrier.” Science Translational Medicine 16.760 (2024): eadi2245.
- Ailer, Štefan, et al. “Evaluation of grape phylloxera’s (Dactylosphaera vitifoliae) occurrence during the BBCH 13-71 phenophases in the 2024 vegetation year.” (2024): 47.
- Ailer, Štefan, et al. “Monitoring the effects of active substances used to treat Plasmopara viticola in Nitra wine district during the 2023 growing year.” (2024): 12.
- Monroe, Kathryn, et al. “PILRA regulates microglial neuroinflammation and lipid metabolism as a candidate therapeutic target for Alzheimer’s disease.” Research Square (2024).
This list is an extraction of all 2023 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Priluck, Aaron, et al. “Validation of 16S rRNA Gene Sequencing of the Periocular Microbiome and Lack of Alteration by Topical Eyedrops.” Translational Vision Science & Technology 12.2 (2023): 32-32.
- Levitan, Orly, et al. “The gut microbiome–Does stool represent right?.” Heliyon 9.3 (2023).
- Alvarez-Quinto, Robert, et al. “Complete genome sequence of a new mitovirus associated with walking iris (Trimezia northiana).” Archives of Virology 168.11 (2023): 273.
- Bolus, Stephen, et al. “Effects of tissue type and season on the detection of regulated sugarcane viruses by high throughput sequencing.” CABI Agriculture and Bioscience 4.1 (2023): 34.
- Subedi, Nagendra, et al. “Characterization of Ralstonia pseudosolanacearum diversity and screening host resistance to manage bacterial wilt in South Asia.” bioRxiv (2023): 2023-10.
- Bernard, Jessica K., et al. “Deletion of Endogenous Neuregulin-4 Limits Adaptive Immunity During Interleukin-10 Receptor–Neutralizing Colitis.” Inflammatory Bowel Diseases (2023): izad092.
- Eichmeier, Ales, et al. “Characterization of tomato brown rugose fruit Virus (ToBRFV) detected in Czech Republic.” Diversity 15.2 (2023): 301.
- Chaudhary, Saurabh. “Exploring small RNA in food crops: techniques and approaches.” Plant Small RNA in Food Crops. Academic Press, 2023. 109-127.
- Rott, Philippe C., et al. “Genetic Diversity, Evolution, and Diagnosis of Sugarcane Yellow Leaf Virus from 19 Sugarcane-Producing Locations Worldwide.” Plant Disease ja (2023).
- Maksimović, Olivera, et al. “Virome analysis of irrigation water sources provides extensive insights into the diversity and distribution of plant viruses in agroecosystems.” Water Research (2023): 120712.
Insects, molecular therapy, nutrients and other, were amongst 2023 research topics listed in Google Scholar, where SeqMatic was cited.
- Leung, Marcus HY, et al. “Skin microbiome differentiates into distinct cutotypes with unique metabolic functions upon exposure to polycyclic aromatic hydrocarbons.” Microbiome 11.1 (2023): 1-14.
- Mollov, Dimitre, et al. “Sugarcane mild mosaic virus: The rediscovery of an identified but unrecognized virus.” Plant Pathology 72.2 (2023): 312-321.
- Schupp, Patrick G., et al. “Clarifying the Transcriptional Profiles of Malignant Clones through Multiscale and Multiomic Analysis of Individual Tumors.” bioRxiv (2023): 2023-06.
- Eun, Sungjin, et al. “Modulation of Gut Microbiota and Intestinal Barrier Integrity and Inflammation Profile in High Fat-fed Rats.” Biotechnology and Bioprocess Engineering 28.1 (2023): 74-82.
- Haddock, Naomi L., et al. “Phage diversity in cell-free DNA identifies bacterial pathogens in human sepsis cases.” Nature Microbiology (2023): 1-13.
- Bessho, Shingo, et al. “Systemic exposure to bacterial amyloid curli alters the gut mucosal immune response and the microbiome, exacerbating Salmonella-induced arthritis.” Gut Microbes 15.1 (2023): 2221813.
- Schupp, Patrick. Clarifying the Transcriptional Profiles of Malignant Clones and Nonmalignant Cells of the Microenvironment through Multiscale and Multiomic Analysis of Individual Tumors. Diss. University of California, San Francisco, 2023.
- Yu, Seong-Lan, et al. “Exosomal miR-205-5p Improves Endometrial Receptivity by Upregulating E-Cadherin Expression through ZEB1 Inhibition.” International Journal of Molecular Sciences 24.20 (2023): 15149.
- Rapp, Emma. Characterization of single cells from breast tumors with mutations implicated in treatment response. MS thesis. Norwegian University of Life Sciences, 2023.
- Sharifkhodaei, Zohreh, et al. “Colitis-induced upregulation of tumor necrosis factor receptor-2 (TNFR2) terminates epithelial regenerative signaling to restore homeostasis.” Iscience 26.10 (2023).
Research topics listed in Google Scholar during 2023, where SeqMatic was cited included: neuroinflammations, skin degradation, epilepsy, and other.
- Tubau-Juni, Nuria, et al. “Modulation of colonic immunometabolic responses during Clostridioides difficile infection ameliorates disease severity and inflammation.” Scientific Reports 13.1 (2023): 14708.
- Elizaldi, Sonny R., et al. “CCR7+ CD4 T Cell Immunosurveillance Disrupted in Chronic SIV-Induced Neuroinflammation in Rhesus Brain.” bioRxiv (2023): 2023-08.
- Elizaldi, Sonny R., et al. “CD4 T cell Responses in the CNS during SIV infection.” bioRxiv (2023): 2023-08.
- Misra, Namita, Nükhet Cavusoglu, and Cécile Clavaud. “Method for diagnosing esthetic degradations of skin.” U.S. Patent Application No. 17/621,382.
- van Lengerich, Bettina, et al. “A TREM2-activating antibody with a blood–brain barrier transport vehicle enhances microglial metabolism in Alzheimer’s disease models.” Nature neuroscience 26.3 (2023): 416-429.
- Cramer Jr, Robert A., and Caitlin Kowalski. “Compositions and methods related to fungal hypoxia responsive morphology factor a (hrma) and biofilm architecture factor (baf) proteins.” U.S. Patent Application No. 17/642,592.
- Bershteyn, Marina, et al. “Human pallial MGE-type GABAergic interneuron cell therapy for chronic focal epilepsy.” Cell Stem Cell 30.10 (2023): 1331-1350.
- Moy, Alistar. Transcriptome analysis reveals changes in whole gene expression, biological processes and molecular functions induced by nickel and copper ions in Jack Pine (Pinus banksiana). Diss. Laurentian University of Sudbury, 2023.
- Barker, Scarlett J., et al. “Targeting Transferrin Receptor to Transport Antisense Oligonucleotides Across the Blood-Brain Barrier.” bioRxiv (2023): 2023-04.
In 2023 research topics listed in Google Scholar, where SeqMatic was cited included: micro-organisms, cancer, SARS-CoV-2, and other.
- Leyan, T. A. N. G., et al. “Anti-tim-3 antibodies.” U.S. Patent Application No. 17/621,509.
- Pollet, Kato, et al. “Host miRNAs as biomarkers of SARS-CoV-2 infection: a critical review.” Sensors & Diagnostics 2.1 (2023): 12-35.
- Pickering, Andrew M., and Sang Woo Kim. “Bdellovibrio treatment for amyotrophic lateral sclerosis.” U.S. Patent Application No. 17/780,436.
- Yulyaningsih, Ernie, et al. “DNL343 is an investigational CNS penetrant eIF2B activator that prevents and reverses the effects of neurodegeneration caused by the Integrated Stress Response.” bioRxiv (2023): 2023-08.
- Lee, Yu Jin, et al. “GPR143 controls ESCRT-dependent exosome biogenesis and promotes cancer metastasis.” Dev. Cell 58 (2023): 320-334.
- Shelton, Catherine D., et al. “An early-life microbiota metabolite protects against obesity by regulating intestinal lipid metabolism.” Cell Host & Microbe (2023).
- Eskiyenenturk, Bilge Ozaydin, Min-Hyung Ryu, and Jenny Johnson. “De-repression of nitrogen fixation in gram-positive microorganisms.” U.S. Patent Application No. 17/924,916.
This list is an extraction of all 2022 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Ding, Xia, et al. “PARP1-SNAI2 transcription axis drives resistance to PARP inhibitor, Talazoparib.” Scientific Reports 12.1 (2022): 1-19.
- Doski, Shadin, et al. “Complete sequence and genome characterization of a new potexvirus isolated from Chaenostoma cordatum.” Archives of Virology (2022): 1-4.
- Santos, Dulce, et al. “PIWI Proteins Play an Antiviral Role in Lepidopteran Cell Lines.” Viruses 14.7 (2022): 1442.
- Van den Brande, Stijn, et al. “Identification and profiling of stable microRNAs in hemolymph of young and old Locusta migratoria fifth instars.” Current Research in Insect Science (2022): 100041.
- Lavagi-Craddock, Irene, et al. “Transcriptome Analysis of Citrus Dwarfing Viroid Induced Dwarfing Phenotype of Sweet Orange on Trifoliate Orange Rootstock.” Microorganisms 10.6 (2022): 1144.
- Nair, Anup K., et al. “Generation of Isogenic hiPSCs with Targeted Edits at Multiple Intronic SNPs to Study the Effects of the Type 2 Diabetes Associated KCNQ1 Locus in American Indians.” Cells 11.9 (2022): 1446.
- Wedge, Marie-Eve, et al. “Virally programmed extracellular vesicles sensitize cancer cells to oncolytic virus and small molecule therapy.” Nature communications 13.1 (2022): 1-16.
- Pavani, Krishna Chaitanya, et al. “Hatching is modulated by microRNA-378a-3p derived from extracellular vesicles secreted by blastocysts.” Proceedings of the National Academy of Sciences 119.12 (2022): e2122708119.
- Kim, Ji Min, et al. “Tonsil mesenchymal stem cells-derived extracellular vesicles prevent submandibular gland dysfunction in ovariectomized rats.” Aging (Albany NY) 14.5 (2022): 2194.
- Holmes, Ann E., and Wim J. Kimmerer. “Phytoplankton prey of an abundant estuarine copepod identified in situ using DNA metabarcoding.” Journal of Plankton Research (2022).
Epithelial cell lines, epidermal stem cells, low input sample sequencing, and other, were amongst 2022 research topics listed in Google Scholar, where SeqMatic was cited.
- Kim, Harper S., et al. “Gut-and oral-dysbiosis differentially impact spinal-and bulbar-onset ALS, predicting ALS severity and potentially determining the location of disease onset.” BMC neurology 22.1 (2022): 1-19.
- Wang, Peng, et al. “Exosomes Derived from Epidermal Stem Cells Improve Diabetic Wound Healing.” Journal of Investigative Dermatology (2022).
- Eichmeier, Ales, et al. “Conserved MicroRNAs in Human Nasopharynx Tissue Samples from Swabs Are Differentially Expressed in Response to SARS-CoV-2.” Genes 13.2 (2022): 348.
- Naphade, Swati, et al. “Systematic comparative analysis of strand-specific RNA-seq library preparation methods for low input samples.” Scientific Reports 12.1 (2022): 1-10.
- Ramos, Tiago, et al. “Epithelial Cell-Derived Extracellular Vesicles Trigger the Differentiation of Two Epithelial Cell Lines.” International Journal of Molecular Sciences 23.3 (2022): 1718.
This list is an extraction of all 2021 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Zhu, Hongyao, et al. “Understanding Data Noise and Uncertainty through Analysis of Replicate Samples in DNA-Encoded Library Selection.” Journal of Chemical Information and Modeling (2021).
- Rivarez, Mark Paul Selda, et al. “First Report of Ranunculus white mottle ophiovirus in Slovenia in Pepper with yellow leaf curling symptom and in Tomato.” Plant Disease ja (2021).
- Lal, Arnav, et al. “Comparison of RNA content from hydrophobic interaction chromatography‐isolated seminal plasma exosomes from intrauterine insemination (IUI) pregnancies.” Andrologia (2021): e14325.
- Didion, Elise M., Megan Doyle, and Joshua B. Benoit. “Bacterial Communities of Lab and Field Northern House Mosquitoes (Diptera: Culicidae) Throughout Diapause.” Journal of Medical Entomology (2021).
- Barreiro, Karina, et al. “Urinary extracellular vesicles: Assessment of pre‐analytical variables and development of a quality control with focus on transcriptomic biomarker research.” Journal of extracellular vesicles 10.12 (2021): e12158.
- Misra, Namita, et al. “Multi-omics analysis to decipher the molecular link between chronic exposure to pollution and human skin dysfunction.” Scientific reports 11.1 (2021): 1-18.
- Tiffany, Connor R., et al. “The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum.” Microbiome 9.1 (2021): 1-13.
- Dijkhuizen, Laura W., et al. “Far-Red Light-Induced Azolla filiculoides Symbiosis Sexual Reproduction: Responsive Transcripts of Symbiont Nostoc azollae Encode Transporters Whilst Those of the Fern Relate to the Angiosperm Floral Transition.” Frontiers in plant science 12 (2021).
- Gavrili, Vasileia, et al. “First report of barley virus G infecting corn in Greece.” Journal of Plant Pathology (2021): 1-1.
- Parekh, Mohit, et al. “Extracellular Vesicles Derived From Human Corneal Endothelial Cells Inhibit Proliferation of Human Corneal Endothelial Cells.” (2021).
Wastewater, horses, neuroscience, were amongst 2021 research topics listed in Google Scholar, where SeqMatic was cited.
- Patterson Rosa, Laura, et al. “Two Variants of KIT Causing White Patterning in Stock-Type Horses.” Journal of Heredity (2021).
- Aldinger, Kimberly A., et al. “Spatial and cell type transcriptional landscape of human cerebellar development.” Nature Neuroscience (2021): 1-13.
- Tong, Cindy BS, et al. “Alleviation of Postharvest Skin Dimpling of MN55 Apple Fruit and a Possible Association with Apple stem pitting virus.” HortScience 1.aop (2021): 1-6.
- Abdelrhim, Abdelrazek S., et al. “A new Streptomyces scabies-infecting bacteriophage from Egypt with promising biocontrol traits.” Archives of Microbiology (2021): 1-10.
- Abdelrhim, Abdelrazek S., et al. “A new Streptomyces scabies-infecting bacteriophage from Egypt with promising biocontrol traits.” Archives of Microbiology (2021): 1-10.
- Pierce, Lisa M., and Wendy E. Kurata. “Priming With Toll-Like Receptor 3 Agonist Poly (I: C) Enhances Content of Innate Immune Defense Proteins but Not MicroRNAs in Human Mesenchymal Stem Cell-Derived Extracellular Vesicles.” Frontiers in cell and developmental biology 9 (2021).
- Dang, Tyler, et al. “Next-Generation Sequencing Identification and Characterization of MicroRNAs in Dwarfed Citrus Trees Infected With Citrus Dwarfing Viroid in High-Density Plantings.” Frontiers in Microbiology 12 (2021): 980.
- Yu, Jinjin, Siang Nee Tang, and Patrick KH Lee. “Microbial Communities in Full-Scale Wastewater Treatment Systems Exhibit Deterministic Assembly Processes and Functional Dependency over Time.” Environmental Science & Technology 55.8 (2021): 5312-5323.
- Vucurovic, Ana, et al. “Detection of Four New Tomato Viruses in Serbia using Post-Hoc High-Throughput Sequencing Analysis of Samples from a Large-Scale Field Survey.” Plant Disease ja (2021).
- Huang, Chun-Yuh, et al. “Anti-Inflammatory Effects of Conditioned Medium of Periodontal Ligament-Derived Stem Cells on Chondrocytes, Synoviocytes, and Meniscus Cells.” Stem Cells and Development (2021).
Research topics listed in Google Scholar during 2021, where SeqMatic was cited included: non-model organisms, cardiovascular medicine, virology, and other.
- Erasmus, M. Frank, et al. “A single donor is sufficient to produce a highly functional in vitro antibody library.” Communications biology 4.1 (2021): 1-16.
- Huo, Jun-Yu, et al. “Renal denervation attenuates neuroinflammation in the brain by regulating gut-brain axis in rats with myocardial infarction.” Frontiers in Cardiovascular Medicine 8 (2021).
- Jordan, Ramon, et al. “First complete genome sequence of carnation latent virus, the type member of the genus Carlavirus.” Archives of Virology (2021): 1-5.
- GZ, Kunz Isabelle, et al. “The pelvic flexure separates distinct microbial communities in the equine hindgut.” Scientific Reports (Nature Publisher Group) 11.1 (2021).
- Hincapie, Martha, et al. “Eight species of Poaceae are hosting different genetic and pathogenic strains of Sugarcane mosaic virus in the Everglades Agricultural Area.” Phytopathology ja (2021).
- Reed, Kailee J., et al. “The pelvic flexure separates distinct microbial communities in the equine hindgut.” Scientific Reports 11.1 (2021): 4332-4332.
- Strings-Ufombah, Vanessa, et al. “BB-301: A Silence and Replace AAV-Based Vector for the Treatment of Oculopharyngeal Muscular Dystrophy.” Molecular Therapy-Nucleic Acids (2021).
- Crespo-Garcia, Sergio, et al. “Pathological angiogenesis in retinopathy engages cellular senescence and is amenable to therapeutic elimination via BCL-xL inhibition.” Cell Metabolism (2021).
- Crespo-Garcia, Sergio, et al. “Pathological angiogenesis in retinopathy engages cellular senescence and is amenable to therapeutic elimination via BCL-xL inhibition.” Cell Metabolism (2021).
- Macey, J. Robert, et al. “Evidence of two deeply divergent co-existing mitochondrial genomes in the Tuatara reveals an extremely complex genomic organization.” Communications Biology 4.1 (2021): 1-10.
In 2021 research topics listed in Google Scholar, where SeqMatic was cited included: viral gene drive and other.
- Cambier, Linda, et al. “Extracellular vesicle-associated repetitive element DNAs as candidate osteosarcoma biomarkers.” Scientific reports 11.1 (2021): 1-15.
- Xia, Dan, et al. “Fibrillar Aβ causes profound microglial metabolic perturbations in a novel APP knock-in mouse model.” bioRxiv (2021).
- Xia, Dan, et al. “Fibrillar Aβ causes profound microglial metabolic perturbations in a novel APP knock-in mouse model.” bioRxiv (2021).
- Mackay-Smith, Ava, et al. “Host-specific gene expression as a tool for introduction success in populations of generalist Naupactus parthenogenetic weevils.” bioRxiv (2021).
- Walter, Marius, Rosalba Perrone, and Eric Verdin. “Targeting evolutionary conserved sequences circumvents the evolution of resistance in a viral gene drive against human cytomegalovirus.” bioRxiv (2021).
This list is an extraction of all 2020 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Chen, Qing, et al. “Paneth cell–derived growth factors support tumorigenesis in the small intestine.” Life Science Alliance 4.3 (2020).
- Moriano-Gutierrez, Silvia, et al. “The noncoding small RNA SsrA is released by Vibrio fischeri and modulates critical host responses.” PLoS biology 18.11 (2020): e3000934.
- Liu, Cambrian Y., et al. “TNF Receptor 1 Promotes Early-Life Immunity and Protects against Colitis in Mice.” Cell Reports 33.3 (2020): 108275.
- Bolus, Stephen, et al. “Identification and characterization of Miscanthus yellow fleck virus, a new polerovirus infecting Miscanthus sinensis.” Plos one 15.9 (2020): e0239199.
- Kalubi, Kersey, et al. “Low stringency tests revealed differential gene expression in red maple (Acer rubrum) treated with low doses of nickel.” Plant Gene 24 (2020): 100251.
- Rogers, Scott W., Elizabeth J. Myers, and Lorise C. Gahring. “Age-Associated Tooth Loss and Oral Microbial Dysbiosis in a Mouse Genetic Model of Chronic Nicotine Exposure.” Frontiers in Immunology 11 (2020): 2508.
- Boukari, Wardatou, et al. “Screening for sugarcane yellow leaf virus in sorghum in Florida revealed its occurrence in mixed infections with sugarcane mosaic virus and a new marafivirus.” Crop Protection 139 (2020): 105373.
- Wu, Hao, et al. “Comparative evaluation on the utilization of applied electrical potential in a conductive granule packed biotrickling filter for continuous abatement of xylene: Performance, limitation, and microbial community.” Journal of Environmental Management 274 (2020): 111145.
- Ward, Lewis M., Woodward W. Fischer, and Shawn E. McGlynn. “Candidatus Anthektikosiphon siderophilum OHK22, a New Member of the Chloroflexi Family Herpetosiphonaceae from Oku-okuhachikurou Onsen.” Microbes and environments 35.3 (2020): ME20030.
- Kim, J. S., et al. “Gut microbiota composition modulates inflammation and structure of the vagal afferent pathway.” Physiology & Behavior 225 (2020): 113082.
Research topics listed in Google Scholar during 2020, where SeqMatic was cited included: cancer, HIV, cerebral activity, and other.
- Suriben, Rowena, et al. “Antibody-mediated inhibition of GDF15–GFRAL activity reverses cancer cachexia in mice.” Nature Medicine (2020): 1-7.
- Martínez-González, Elena, et al. “Comparison of methods and characterization of small RNAs from plasma extracellular vesicles of HIV/HCV coinfected patients.” Scientific reports 10.1 (2020): 1-13.
- Aldinger, Kimberly A., et al. “Spatial and single-cell transcriptional landscape of human cerebellar development.” bioRxiv (2020).
- Leung, Marcus HY, et al. “Changes of the human skin microbiota upon chronic exposure to polycyclic aromatic hydrocarbon pollutants.” Microbiome 8.1 (2020): 1-17.
- Li, Ruhui, et al. “First identification and molecular characterization of a new badnavirus infecting camellia.” Archives of Virology (2020): 1-4.
- Nemchinov, Lev, and Samuel Grinstead. “Identification of a novel isolate of Alfalfa virus S from China suggests a possible role of seed contamination in the distribution of the virus.” Plant Disease ja (2020).
- Vaskova, Evgeniya, et al. “Sacubitril/Valsartan Improves Cardiac Function and Decreases Myocardial Fibrosis Via Downregulation of Exosomal miR‐181a in a Rodent Chronic Myocardial Infarction Model.” Journal of the American Heart Association 9.13 (2020): e015640.
- Olomu, Isoken Nicholas, et al. “Elimination of “kitome” and “splashome” contamination results in lack of detection of a unique placental microbiome.” BMC Microbiology 20.1 (2020): 1-19.
- Zheng, Luping, et al. “First identification and molecular characterization of a novel cavemovirus infecting Epiphyllum spp.” Archives of Virology (2020): 1-4.
- Bettadapur, Akhila, et al. “Establishment of quantitative RNAi-based forward genetics in Entamoeba histolytica and identification of genes required for growth.” bioRxiv (2020).
Plant pathology, immunology, rhinoceros, and other, were amongst 2020 research topics listed in Google Scholar, where SeqMatic was cited.
- McNeal, Andrew S., et al. “MicroRNAs Restrain Proliferation in BRAFV600E Melanocytic Nevi.” bioRxiv (2020).
- Zheng, Luping, Madeleine Chen, and Ruhui Li. “Camellia ringspot-associated virus 4, a proposed new foveavirus from Camellia japonica.” Archives of Virology (2020): 1-4.
- Mingels, Lina, et al. “Extracellular vesicles spread the RNA interference signal of Tribolium castaneum TcA cells.” Insect Biochemistry and Molecular Biology (2020): 103377.
- Sohn, Eun Jung, Hwan Tae Park, and Yoon Kyung Shin. “Exosomes derived from differentiated Schwann cells inhibit Schwann cell migration via microRNAs.” Neuroreport 31.7 (2020): 515-522.
- Bloch, Sarah E., et al. “Biological nitrogen fixation in maize: optimizing nitrogenase expression in a root-associated diazotroph.” Journal of Experimental Botany (2020).
- Salazar, Carolina, et al. “Detection of cellular miRNAs in plasma of Salmo salar during an ISAV infection.” Aquaculture Reports 17 (2020): 100320.
- Watanabe, Shizu, et al. “Identification of Genes That Result in High Mortality of Oryctes rhinoceros (Scarabaeidae: Coleoptera) When Targeted Using an RNA Interference Approach: Implications for Large Invasive Insects.” Annals of the Entomological Society of America (2020).
- Li, Chenyu, et al. “High sensitivity detection of SARS-CoV-2 using multiplex PCR and a multiplex-PCR-based metagenomic method.” bioRxiv (2020).
- Lu, Xiaoxiao, et al. “Neutrophil L-plastin controls ocular paucibacteriality and susceptibility to keratitis.” Frontiers in Immunology 11 (2020): 547.
- Thapa, Shree P., et al. “Genome‐wide analyses of Liberibacter species provides insights into evolution, phylogenetic relationships, and virulence factors.” Molecular Plant Pathology (2020).
In 2020 research topics listed in Google Scholar, where SeqMatic was cited included: horses, cherries, wastewater, and other.
- Yu, Wei, et al. “Intestinal flora dysbiosis aggravates cognitive dysfunction associated with neuroinflammation in heart failure.” Journal of Cardiac Failure (2020).
- Bačnik, Katarina, et al. “Viromics and infectivity analysis reveal the release of infective plant viruses from wastewater into the environment.” Water Research (2020): 115628.
- Kumar, Senthil R., et al. “RNA cargos in extracellular vesicles derived from blood serum in pancreas associated conditions.” Scientific Reports 10.1 (2020): 1-10.
- Brewer, Eric, et al. “Discovery and molecular characterization of a novel trichovirus infecting sweet cherry.” Virus Genes (2020): 1-6.
- Ward, Lewis M., et al. “Microbial mats in the Turks and Caicos Islands reveal diversity and evolution of phototrophy in the Chloroflexota order Aggregatilineales.”
- Breusing, Corinna, Maximilian Franke, and Curtis Robert Young. “Intra-host symbiont diversity in eastern Pacific cold seep tubeworms identified by the 16S-V6 region, but undetected by the 16S-V4 region.” PloS one 15.1 (2020): e0227053.
- Smits, Katrien, et al. “Maternal Recognition of Pregnancy in the Horse: Are MicroRNAs the Secret Messengers?.” International Journal of Molecular Sciences 21.2 (2020): 419.
This list is an extraction of all 2019 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Nakamura, Keigo, et al. “Effects of miR-98 in intrauterine extracellular vesicles on maternal immune regulation during the peri-implantation period in cattle.” Scientific Reports 9.1 (2019): 1-10.
- Kong, Xue, Yanan Li, and Haibin Zhang. “Adaptation evolution and bioactivity of galectin from the deep sea Vesicomyidae clam Archivesica packardana.” Fish & Shellfish Immunology (2019).
- Jiang, Hao, et al. “Differential expression of circulating exosomal microRNAs in refractory intracranial atherosclerosis associated with antiangiogenesis.” Scientific Reports 9.1 (2019): 1-9.
- Sakurai, Kenichi, et al. “Association between gut microbiota composition and glycoalbumin level during pregnancy in Japanese women: Pilot study from Chiba Study of Mother and Child Health.” Journal of diabetes investigation (2019).
- Chan, E. W., et al. “Investigations of Aerobic Methane Oxidation in Two Marine Seep Environments Part 1: Chemical Kinetics.” Journal of Geophysical Research: Oceans (2019).
- Eichmeier, Ales, et al. “MicroRNAs in Vitis vinifera cv. Chardonnay Are Differentially Expressed in Response to Diaporthe Species.” Genes 10.11 (2019): 905.
- Stare, Tjaša, et al. “Multiomics analysis of tolerant interaction of potato with potato virus Y.” Scientific Data 6.1 (2019): 1-11.
- Sifuentes-Dominguez, Luis F., et al. “SCGN deficiency results in colitis susceptibility.” eLife 8 (2019): e49910.
- Wu, L-P., et al. “Complete genomic sequence of tea-oil camellia deltapartitivirus 1, a novel virus from Camellia oleifera.” Archives of virology (2019): 1-5.
- Mehle, Natasa, et al. “First report of cucurbit aphid-borne yellows virus in Cucurbita pepo and Cucurbita maxima in Slovenia.” Plant Disease ja (2019).
Insects, molecular therapy, nutrients and other, were amongst 2019 research topics listed in Google Scholar, where SeqMatic was cited.
- Valihrach, Lukas, Peter Androvic, and Mikael Kubista. “Circulating miRNA analysis for cancer diagnostics and therapy.” Molecular Aspects of Medicine (2019).
- Tan, Shih-hua, et al. “Full genome characterization of 12 citrus tatter leaf virus isolates for the development of a detection assay.” PloS one 14.10 (2019): e0223958.
- Kowalski, Caitlin H., et al. “Fungal biofilm morphology impacts hypoxia fitness and disease progression.” Nature microbiology (2019): 1-12.
- Ray, Kathryn J., et al. “High-throughput Sequencing of Pooled Samples to Determine Community-Level Microbiome Diversity.” Annals of Epidemiology (2019).
- Wu, L., et al. “First identification and molecular characterization of a novel cherry robigovirus.” Archives of virology (2019): 1-4.
- Liu, Huawei, et al. “Characterization of three new viruses of the family Betaflexiviridae associated with camellia ringspot disease.” Virus research (2019): 197668.
- Lee, Sunhye, et al. “Beneficial Effects of Non-Encapsulated or Encapsulated Probiotic Supplementation on Microbiota Composition, Intestinal Barrier Functions, Inflammatory Profiles, and Glucose Tolerance in High Fat Fed Rats.” Nutrients 11.9 (2019): 1975.
- Peng, Hui, et al. “Non-Antibiotic Small Molecule Regulation of Dhfr-Based Destabilizing Domains in Vivo.” Molecular Therapy-Methods & Clinical Development (2019).
- Santos, Dulce, et al. “Generation of Virus-and dsRNA-Derived siRNAs with Species-Dependent Length in Insects.” Viruses 11.8 (2019): 738.
- Heinicke, Fatima, et al. “Systematic assessment of commercially available low-input miRNA library preparation kits.” bioRxiv (2019): 702456.
Research topics listed in Google Scholar during this year, where SeqMatic was cited included: bacteria, maternal gut microbes, and other.
- Paz Narváez, Iván Enrique, and Juan Carlos Menjivar Flores. “Effect of compost on the rhizospheric bacteria diversity in mulberry (Morus alba) crops.” Revista Colombiana de Biotecnología 21.1 (2019): 47-55.
- Naranjo, Leslie, et al. “Recombinant Antibodies against Mycolactone.” Toxins 11.6 (2019): 346.
- Olmedo Velarde, Alejandro, et al. “Characterization of Ti ringspot-associated virus, a novel emaravirus associated with an emerging ringspot disease of Cordyline fruticosa (L.).” Plant Disease ja.
- Gostinčar, Cene, et al. “Fifty Aureobasidium pullulans genomes.” Environmental microbiology (2019).
- Sato, Yumi, et al. “Maternal gut microbiota is associated with newborn anthropometrics in a sex-specific manner.” Journal of Developmental Origins of Health and Disease (2019): 1-8.
- Peng, L., et al. “Molecular characterization and detection of two carlaviruses infecting cactus.” Archives of virology (2019): 1-4.
- Wang, Bin, et al. “miR-26a Limits Muscle Wasting and Cardiac Fibrosis through Exosome-Mediated microRNA Transfer in Chronic Kidney Disease.” Theranostics 9.7 (2019): 1864.
- Wilson, R. Paul, et al. “STAT2 dependent Type I Interferon response promotes dysbiosis and luminal expansion of the enteric pathogen Salmonella Typhimurium.” PLoS pathogens 15.4 (2019): e1007745.
- Cornejo-Franco, Juan F., et al. “A new tymovirus isolated from Solanum quitoense: characterization and prevalence in two solanaceous crops in Ecuador.” Plant Disease ja (2019).
- Tong, Xinzhao, et al. “Neutral Processes Drive Seasonal Assembly of the Skin Mycobiome.” mSystems 4.2 (2019): e00004-19.
In 2019 research topics listed in Google Scholar, where SeqMatic was cited included: HIV, neurotoxicology, heart failure, tomatoes, and other.
- Lin, Xiaoyuan, et al. “Bovine embryo-secreted microRNA-30c is a potential non-invasive biomarker for hampered preimplantation developmental competence.” Frontiers in genetics 10 (2019): 315.
- Eichmeier, Ales, et al. “High-throughput small RNA sequencing for evaluation of grapevine sanitation efficacy.” Journal of virological methods (2019).
- Mich, John K., and Viviana Gradinaru. “Epigenetic landscape and AAV targeting of human neocortical cell classes.” (2019).
- Kunz, Isabelle GZ, et al. “Equine Fecal Microbiota Changes Associated with Anthelmintic Administration.” Journal of Equine Veterinary Science (2019).
- Oldenburg, Catherine E., et al. “Indirect effect of azithromycin use on the intestinal microbiome diversity of untreated children: A randomized trial.” Open Forum Infectious Diseases. 2019.
- Addy, Hardian Susilo, Abdelmonim Ali Ahmad, and Qi Huang. “Molecular and Biological Characterization of Ralstonia Phage RsoM1USA, a New Species of P2virus, Isolated in the United States.” Frontiers in microbiology 10 (2019).
- Bratsch, Sara, et al. “Characterization of Tomato necrotic spot virus, a subgroup 1 ilarvirus causing necrotic foliar, stem, and fruit symptoms in tomatoes in the United States.” Plant Disease ja (2019).
- Charrier, Henri, et al. “In vitro characterization of cardiac extracellular vesicles involved in transport of the circulating biomarkers of heart failure miR-21-5p, miR-23a-3p and miR-222-3p.” Journal of Extracellular Vesicles 7 (2018): 44-44.
- Kith, Óscar Brochado, et al. “Liver-specific miRNAs are detected in exosomes from HIV/HCV patients.” Journal of Extracellular Vesicles 7 (2018): 44-44.
- Zou, Wei, et al. “A Comprehensive RNA-seq Analysis of Human Bocavirus 1 Transcripts in Infected Human Airway Epithelium.” Viruses 11.1 (2019): 33.
- Naguib, Adam, et al. “SUPT4H1 Depletion Leads to a Global Reduction in RNA.” Cell reports 26.1 (2019): 45-53.
- Laferriere, Nicole R., et al. “Inhibition of microRNA-124-3p as a novel therapeutic strategy for the treatment of Gulf War Illness: Evaluation in a rat model.” Neurotoxicology 71 (2019): 16-30.
This list is an extraction of all 2018 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Cole, Emily J., et al. “Investigating responses of soil bacterial community composition to hardwood biochar amendment using high-throughput PCR sequencing.” Applied Soil Ecology (2018).
- Choi, Song-Yi, et al. “Regulating Osteogenic Differentiation by Suppression of Exosomal microRNAs.” Tissue Engineering ja (2018).
- Coates, R. Cameron, et al. “Systematic investigation of CRISPR–Cas9 configurations for flexible and efficient genome editing in Corynebacterium glutamicum NRRL-B11474.” Journal of industrial microbiology & biotechnology (2018): 1-15.
- Van den Brande, Stijn, et al. “The presence of extracellular microRNAs in the media of cultured Drosophila cells.” Scientific Reports 8.1 (2018): 17312.
- Enjeti, Anoop K., et al. “Circulating microvesicles are less procoagulant and carry different miRNA cargo in myelodysplasia.” Blood Cells, Molecules, and Diseases (2018).
- Oldenburg, Catherine E., et al. “Effect of commonly-used pediatric antibiotics on gut microbial diversity in preschool children in Burkina Faso: A randomized clinical trial.” Open Forum Infectious Diseases. 2018.
- Wu, Liping, Luping Zheng, and Ruhui Li. “First report of Alternanthera mosaic virus infecting Epiphyllum spp.” Plant Disease ja (2018).
- Wintermantel, William M., et al. “First report of Cucurbit chlorotic yellows virus infecting melon in the New World.” Plant Disease ja (2018).
- Mehle, Natasa, et al. “First report of Apium virus Y and carrot thin leaf virus in parsley in Slovenia.” Plant Disease ja (2018).
- Kong, Xue, et al. “Two novel short peptidoglycan recognition proteins (PGRPs) from the deep sea Vesicomyidae clam Archivesica packardana: identification, recombinant expression and bioactivity.” Frontiers in Physiology 9 (2018): 1476.
In 2018 research topics listed in Google Scholar, where SeqMatic was cited included: wheat, potatoes, acupuncture, and other.
- Ward, Lewis M., et al. “Thermophilic Lithotrophy and Phototrophy in an Intertidal, Iron-rich, Geothermal Spring.” bioRxiv (2018): 428698.
- Addy, Hardian Susilo, et al. “Host range and molecular characterization of a lytic Pradovirus-like Ralstonia phage RsoP1IDN isolated from Indonesia.” Archives of Virology (2018): 1-6.
- Zheng, Luping, et al. “Molecular characterization and detection of a new closterovirus identified from blackcurrant by high-throughput sequencing.” Virus genes (2018): 1-5.
- Su, Zhen, et al. “Electrically stimulated acupuncture increases renal blood flow through exosomes-carried miR-181.” American Journal of Physiology-Renal Physiology (2018).
- Luna, Emily, et al. “Bacteria Associated with Russian Wheat Aphid (Diuraphis noxia) Enhance Aphid Virulence to Wheat.” Phytobiomes ja (2018).
- Datta, Kaustubh, et al. “Macrophage-derived Neuropilin-2 exhibits novel tumor-promoting functions.” Cancer research (2018): canres-0562.
- Salazar, Carolina, and Sergio H. Marshall. “Involvement of selected cellular miRNAs in the in vitro and in vivo infection of infectious salmon anemia virus (ISAV).” Microbial pathogenesis (2018).
- Ward, L. M., S. E. McGlynn, and W. W. Fischer. “Draft Genome Sequences of Two Basal Members of the Anaerolineae Class of Chloroflexi from a Sulfidic Hot Spring.” Genome announcements 6.25 (2018): e00570-18.
- Ward, L. M., S. E. McGlynn, and W. W. Fischer. “Draft Genome Sequence of a Divergent Anaerobic Member of the Chloroflexi Class Ardenticatenia from a Sulfidic Hot Spring.” Genome announcements 6.25 (2018): e00571-18.
- Wu, Liping, et al. “Structure and Genome Organization of a Novel Fiji Strain of Sweet Potato Vein Clearing Virus Identified by High-Throughput Sequencing.” Genome announcements 6.24 (2018): e00462-18.
In 2018 research topics listed in Google Scholar, where SeqMatic was cited included: respiratory virus infections, apples, maple, neurological diseases, and other.
- Liu, Huawei, et al. “Characterization of a new apple luteovirus identified by high-throughput sequencing.” Virology journal 15.1 (2018): 85.
- Gòdia, Marta, et al. “A technical assessment of the porcine ejaculated spermatozoa for a sperm-specific RNA-seq analysis.” Systems biology in reproductive medicine (2018): 1-13.
- Nkongolo, Kabwe, Gabriel Theriault, and Paul Michael. “Differential levels of gene expression and molecular mechanisms between red maple (Acer rubrum) genotypes resistant and susceptible to nickel toxicity revealed by transcriptome analysis.” Ecology and Evolution (2018).
- Grasedieck, Sarah, et al. “Comprehensive micro RNA expression profiling in cerebrospinal fluid distinguishes between neurological disease classes.” Neuropathology and applied neurobiology (2018).
- Gomez-Silvan, Cinta, et al. “A comparison of methods used to unveil the genetic and metabolic pool in the built environment.” Microbiome 6.1 (2018): 71.
- Ahmad, Abdelmonim Ali, et al. “Sequencing, genome analysis and host range of a novel Ralstonia phage, RsoP1EGY, isolated in Egypt.” Archives of virology (2018): 1-4.
- Carossino, Mariano, et al. “Downregulation of eca-mir-128 in seminal exosomes and enhanced expression of CXCL16 in the stallion reproductive tract are associated with long-term persistence of equine arteritis virus.” Journal of virology (2018): JVI-00015.
- Ward, Lewis Michael, et al. “Evolution of Phototrophy in the Chloroflexi Phylum Driven by Horizontal Gene Transfer.” Frontiers in Microbiology 9 (2018): 260.
- Wu, L-P., et al. “Molecular characterization of a novel rhabdovirus infecting blackcurrant identified by high-throughput sequencing.” Archives of virology (2018): 1-4.
- Rajan, Saravanan, et al. “Recombinant human B cell repertoires enable screening for rare, specific, and natively paired antibodies.” Communications Biology 1.1 (2018): 5.
- Chahar, Harendra Singh, et al. “Respiratory Syncytial Virus Infection Changes Cargo Composition of Exosome Released from Airway Epithelial Cells.” Scientific reports 8.1 (2018): 387.
This list is an extraction of all 2017 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Poff, Kirsten E., et al. “The Native Hawaiian Insect Microbiome Initiative: A Critical Perspective for Hawaiian Insect Evolution.” Insects 8.4 (2017): 130.
- Križnik, Maja, et al. “Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection.” Frontiers in plant science 8 (2017).
- Green, Kelsie, et al. “Characterization of a new tymovirus causing stunting and chlorotic mosaic in naranjilla (Solanum quitoense).” Plant Disease ja (2017).
- Wang, Yanan, et al. “Genome characterization and distribution of Taro bacilliform CH virus on taro in Hawaii, USA.” European Journal of Plant Pathology (2017): 1-5.
- Liu, Haiyan E., et al. “Workflow optimization of whole genome amplification and targeted panel sequencing for CTC mutation detection.” npj Genomic Medicine 2.1 (2017): 34.
- Goldford, Joshua E., et al. “Emergent Simplicity in Microbial Community Assembly.” bioRxiv (2017): 205831.
- Haridas, Dhanya, et al. “Laboratory growth of denitrifying water column microbial consortia from deep-sea shipwrecks in the northern Gulf of Mexico.” F1000Research 6 (2017).
- Eicholtz, Mathhew, et al. “First report of Beet western yellows virus infecting Epiphyllum spp.” Plant Disease ja (2017).
- Pecman, Anja, et al. “Next Generation Sequencing for Detection and Discovery of Plant Viruses and Viroids: Comparison of Two Approaches.” Frontiers in Microbiology 8 (2017): 1998.
- Ward, Lewis M., Shawn E. McGlynn, and Woodward W. Fischer. “Draft Genome Sequences of a Novel Lineage of Armatimonadetes Recovered from Japanese Hot Springs.” Genome announcements 5.40 (2017): e00820-17.
In 2017 research topics listed in Google Scholar, where SeqMatic was cited included: peach, alphalpha, bacteria, and other.
- Ward, Lewis M., Shawn E. McGlynn, and Woodward W. Fischer. “Draft Genome Sequence of Chloracidobacterium sp. CP2_5A, a Phototrophic Member of the Phylum Acidobacteria Recovered from a Japanese Hot Spring.” Genome announcements 5.40 (2017): e00821-17.
- Tong, Xinzhao, et al. “City-scale distribution and dispersal routes of mycobiome in residences.” Microbiome 5.1 (2017): 131.
- Cherry, Jonathan J., et al. “In vitro and in vivo effects of 2, 4 diaminoquinazoline inhibitors of the decapping scavenger enzyme DcpS: Context-specific modulation of SMN transcript levels.” PloS one 12.9 (2017): e0185079.
- Kugadas, Abirami, et al. “Role of Microbiota in Strengthening Ocular Mucosal Barrier Function Through Secretory IgA.” Investigative Ophthalmology & Visual Science 58.11 (2017): 4593-4600.
- Wang, Yanan, et al. “Molecular characterization and distribution of two strains of Dasheen mosaic virus on taro in Hawaii, USA.” Plant Disease ja (2017).
- Mollov, Dimitre, and Martha Malapi-Wight. “Next Generation Sequencing: a useful tool for detection of sugarcane viruses in quarantine programs.” Proceedings of the International Society of Sugar Cane Technologists. Vol. 29. 2016.
- Kriznik, Maja, et al. “Salicylic acid perturbs small RNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection and renders plants tolerant to the pathogen.” bioRxiv (2017): 130757.
- Kutnjak, Denis, Santiago F. Elena, and Maja Ravnikar. “Time-sampled population sequencing reveals the interplay of selection and genetic drift in experimental evolution of Potato virus Y.” Journal of Virology (2017): JVI-00690.
- Nemchinov, Lev G., Samuel C. Grinstead, and Dimitre S. Mollov. “Alfalfa virus S, a new species in the family Alphaflexiviridae.” PloS one 12.5 (2017): e0178222.
- Wu, L-P., et al. “Molecular characterization of a novel luteovirus from peach identified by high-throughput sequencing.” Archives of Virology (2017): 1-3.
This list is an extraction
In 2017 research topics listed in Google Scholar, where SeqMatic was cited included: potatoes, grapes, viruses, and other.
- Liu, Meiyan, et al. “The STENOFOLIA gene from Medicago alters leaf width, flowering time and chlorophyll content in transgenic wheat.” Plant Biotechnology Journal (2017).
- Kriznik, Maja, et al. “Tolerance To PVY Infection In Potato Is Conditioned By Perturbation Of Small RNA-Gibberellin Regulatory Network.” bioRxiv (2017): 130757.
- Doan, Thuy, et al. “Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial.” Clinical Infectious Diseases 64.9 (2017): 1147-1153.
- Vaughn, Alexandra C., et al. “Energy-dense diet triggers changes in gut microbiota, reorganization of gut-brain vagal communication and increases body fat accumulation.” Acta neurobiologiae experimentalis 77.1 (2017): 18.
- Niu, Jinzhi, et al. “Infections of virulent and avirulent viruses differentially influenced the expression of dicer-1, ago-1, and microRNAs in Bombus terrestris.” Scientific Reports 7 (2017).
- Phua, Terri, et al. “Angiopoietin-like 4 Mediates Colonic Inflammation by Regulating Chemokine Transcript Stability via Tristetraprolin.” Scientific Reports 7 (2017).
- Sen, Tanusree, et al. “Diet-driven microbiota dysbiosis is associated with vagal remodeling and obesity.” Physiology & Behavior (2017).
- Maker, Allison, et al. “Draft Genome Sequence of Hydrogenibacillus schlegelii MA48, a Deep-Branching Member of the Bacilli Class of Firmicutes.” Genome Announcements 5.3 (2017): e00380-16.
This list is an extraction of all 2016 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Grasedieck, Sarah, et al. “Towards Stratification of Lymphomas with Involvement of the Central Nervous System Using miRNA-Seq from Small Volumes of Cerebrospinal Fluid.” Blood 128.22 (2016): 1751-1751.
- Koyama, Satoshi, et al. “Dynamic changes of serum microRNA‐122‐5p through therapeutic courses indicates amelioration of acute liver injury accompanied by acute cardiac decompensation.” ESC Heart Failure (2016).
- Leung, Marcus HY, Kelvin CK Chan, and Patrick KH Lee. “Skin fungal community and its correlation with bacterial community of urban Chinese individuals.” Microbiome 4.1 (2016): 46.
- Van Goethem, Alan, et al. “Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples.” Scientific Reports 6 (2016): 37876.
- Khankhum, Surasak, et al. “RNAseq Analysis of Endornavirus-Infected vs. Endornavirus-Free Common Bean (Phaseolus vulgaris) Cultivar Black Turtle Soup.” Frontiers in Microbiology 7 (2016): 1905.
- Haney, Staci L., et al. “Dnmt3a Is a Haploinsufficient Tumor Suppressor in CD8+ Peripheral T Cell Lymphoma.” PLoS Genet 12.9 (2016): e1006334.
- Haney, Staci L., et al. “Loss of Dnmt3a induces CLL and PTCL with distinct methylomes and transcriptomes in mice.” Scientific Reports 6 (2016).
- Al Rwahnih, Maher, et al. “Description of a Novel Monopartite Geminivirus and Its Defective Subviral Genome in Grapevine.” Phytopathology (2016): PHYTO-07.
- Schafleitner, Roland, et al. “Identification of single nucleotide polymorphism markers associated with resistance to bruchids (Callosobruchus spp.) in wild mungbean (Vigna radiata var. sublobata) and cultivated V. radiata through genotyping by sequencing and quantitative trait locus analysis.” BMC Plant Biology 16.1 (2016): 159.
- Obradović, Davor, et al. “A Cytolethal Distending Toxin Variant from Aggregatibacter actinomycetemcomitans with an Aberrant CdtB That Lacks the Conserved Catalytic Histidine 160.” PloS one 11.7 (2016): e0159231.
In 2016 research topics listed in Google Scholar, where SeqMatic was cited included: beans, lymphoma, bacteria and other.
- Wang, Juan, et al. “Urea Transporter B and MicroRNA-200c Differ in Kidney Outer versus Inner Medulla following Dehydration.” The American Journal of the Medical Sciences (2016).
- Theriault, Gabriel, Paul Michael, and Kabwe Nkongolo. “Comprehensive Transcriptome Analysis of Response to Nickel Stress in White Birch (Betula papyrifera).” PloS one 11.4 (2016): e0153762.
- Haney, Staci L., et al. “Promoter Hypomethylation and Expression Is Conserved in Mouse Chronic Lymphocytic Leukemia Induced by Decreased or Inactivated Dnmt3a.” Cell reports 15.6 (2016): 1190-1201.
- Gonzales-Cope, Michelle, et al. “Histone H4 acetylation and the epigenetic reader Brd4 are critical regulators of pluripotency in embryonic stem cells.” BMC Genomics 17.1 (2016): 1.
- Harp, Djana, et al. “Exosomes derived from endometriotic stromal cells have enhanced angiogenic effects in vitro.” Cell and Tissue Research (2016): 1-10.
- Groves, Carol, et al. “Seed Transmission of Soybean vein necrosis virus: The First Tospovirus Implicated in Seed Transmission.” PLoS One 11.1 (2016).
- Niu, Jinzhi, et al. “In vivo study of Dicer-2-mediated immune response of the small interfering RNA pathway upon systemic infections of virulent and avirulent viruses in Bombus terrestris.” Insect biochemistry and molecular biology 70 (2016): 127-137.
This list is an extraction of all 2015 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
- Al Rwahnih, et al. “First report of Grapevine Pinot gris virus infecting Grapevine in the United States.” Plant Disease ja (2015).
- Wu, M., et al. “A novel pathway of cellular activation mediated by antiphospholipid antibody‐induced extracellular vesicles.” Journal of Thrombosis and Haemostasis 13.10 (2015): 1928-1940.
- Hendel, Ayal, et al. “Chemically Modified Guide RNAs Enhance CRISPR-Cas Genome Editing in Human Primary Cells.” Nat Biotechnol Nature Biotechnology 33.9 (2015): 985-89. Web.
- Hemp, James, et al. “Draft Genome Sequence of Ornatilinea apprima P3M-1, an Anaerobic Member of the Chloroflexi Class Anaerolineae.” Genome Announcements 3.6 (2015): e01353-15.
- Ward, Lewis M., et al. “Draft Genome Sequence of Leptolinea tardivitalis YMTK-2, a Mesophilic Anaerobe from the Chloroflexi Class Anaerolineae.” Genome Announcements 3.6 (2015): e01356-15.
- Hemp, James, et al. “Draft Genome Sequence of Levilinea saccharolytica KIBI-1, a Member of the Chloroflexi Class Anaerolineae.” Genome Announcements 3.6 (2015): e01357-15.
- Hemp, James, et al. “Draft Genome Sequence of Ardenticatena maritima 110S, a Thermophilic Nitrate-and Iron-Reducing Member of the Chloroflexi Class Ardenticatenia.” Genome Announcements 3.6 (2015): e01347-15.
- Pace, Laura A., et al. “Draft Genome of Thermanaerothrix daxensis GNS-1, a Thermophilic Facultative Anaerobe from the Chloroflexi Class Anaerolineae.” Genome Announcements 3.6 (2015): e01354-15.
- Ward, Lewis M., et al. “Draft Genome Sequence of Herpetosiphon geysericola GC-42, a Nonphototrophic Member of the Chloroflexi Class Chloroflexia.” Genome Announcements 3.6 (2015): e01352-15.
- Simpson L, et al. (2015) Comparison of the Mitochondrial Genomes and Steady State Transcriptomes of Two Strains of the Trypanosomatid Parasite, Leishmania tarentolae. PLoS Negl Trop Dis 9(7): e0003841. doi:10.1371/journal.pntd.0003841
In 2015 research topics listed in Google Scholar, where SeqMatic was cited included: plant diseases, beer, bacteria from the order of Anaerolineales, and other.
- Shechner, David M., et al. “Multiplexable, locus-specific targeting of long RNAs with CRISPR-Display.” Nature methods 12.7 (2015): 664-670.
- Peterson, M. F., et al. (2015). Integrated systems for exosome investigation. Methods.
- Supplement, C. (2015). Abstracts from the Fourth International Meeting of ISEV, ISEV2015, Washington, D.C., USA, 23-26 April 2015. Journal Of Extracellular Vesicles, 4. Retrieved from http://www.journalofextracellularvesicles.net/index.php/jev/article/view/27783
- Bostwick, W. (2015, March 25). My Quest to Reengineer a Legendary Beer in a Dirty Kitchen. Retrieved from Wired Magazine: http://www.wired.com/2015/03/the-very-best-beer/
This list is an extraction of all 2014 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
This list is an extraction of all 2013 research topics listed in Google Scholar, where SeqMatic is cited as a CRO Laboratory Service Provider.
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